Yayınlar & Eserler

Yayın Ağı
SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

Review of the relationship between growth hormone and SARS-CoV-2 infection

Rasmi Y., KIRBOĞA K. K., Roshanravan N., Tekin B., Jalali L., Ghazizadeh F.
Future Virology , 2025 (SCI-Expanded) identifier

Therapeutic potential of Laurus nobilis extract by experimental and computational approaches: phenolic content and bioactivities for antioxidant, antidiabetic, and anticholinergic properties

Altın S., IŞIK M., ALP C., Dikici E., KÖKSAL E., KIRBOĞA K. K., et al.
Frontiers in Chemistry , cilt.13, 2025 (SCI-Expanded) identifier identifier

Exploring the Genome-wide Expression Level of the Bacterial Strain Belonging to Bacillus safensis (MM19) Against Phomopsis viticola

SİLME R. S., Baysal Ö., Can A., Kürüm Y., Korkut A., KIRBOĞA K. K., et al.
Current Microbiology , cilt.81, sa.12, 2024 (SCI-Expanded) identifier identifier

Spectrochemical and explainable artificial intelligence approaches for molecular level identification of the status of critically ill patients with COVID-19

Tokgoz G., KIRBOĞA K. K., ÖZEL F., YÜCEPUR S., ARDAHANLI İ., GURBANOV R.
Talanta , cilt.279, 2024 (SCI-Expanded) identifier identifier

Data mining and molecular dynamics analysis to detect HIV-1 reverse transcriptase RNase H activity inhibitor

Ghafoor N. A., KIRBOĞA K. K., Baysal Ö., Süzek B. E., SİLME R. S.
Molecular Diversity , cilt.28, sa.4, ss.1869-1888, 2024 (SCI-Expanded) identifier identifier

Explainable artificial intelligence-assisted virtual screening and bioinformatics approaches for effective bioactivity prediction of phenolic cyclooxygenase-2 (COX-2) inhibitors using PubChem molecular fingerprints

Rudrapal M., KIRBOĞA K. K., Abdalla M., Maji S.
Molecular Diversity , cilt.28, sa.4, ss.2099-2118, 2024 (SCI-Expanded) identifier identifier

Explainable artificial intelligence in the design of selective carbonic anhydrase I-II inhibitors via molecular fingerprinting

KIRBOĞA K. K., IŞIK M.
Journal of Computational Chemistry , cilt.45, sa.18, ss.1530-1539, 2024 (SCI-Expanded) identifier identifier

Feature Engineering-Assisted Drug Repurposing on Disease-Drug Transcriptome Profiles in Gastric Cancer

KIRBOĞA K. K., Rudrapal M.
Assay and Drug Development Technologies , cilt.22, sa.4, ss.181-191, 2024 (SCI-Expanded) identifier identifier

Synthesis of cellulose nanocrystals from spinach waste for insulin delivery: comparison to chitosan nanoparticles

Esmaeili J., Pirzadeh K., Pakrooyan M., Esmaeilpour Lukolayeh M., KIRBOĞA K. K.
New Journal of Chemistry , cilt.48, sa.17, ss.7953-7963, 2024 (SCI-Expanded) identifier

Bladder cancer gene expression prediction with explainable algorithms

KIRBOĞA K. K.
Neural Computing and Applications , cilt.36, sa.4, ss.1585-1597, 2024 (SCI-Expanded) identifier

Targeting Breast Cancer with N-Acetyl-D-Glucosamine: Integrating Machine Learning and Cellular Assays for Promising Results

Baysal Ö., Genç D., SİLME R. S., KIRBOĞA K. K., Çoban D., Ghafoor N. A., et al.
Anti-Cancer Agents in Medicinal Chemistry , cilt.24, sa.5, ss.334-347, 2024 (SCI-Expanded) Creative Commons License identifier identifier

Identification of potential antigenic proteins and epitopes for the development of a monkeypox virus vaccine: an in silico approach

AKTAŞ E., SEZERMAN O. U., Özer M., KIRBOĞA K. K., Köseoğlu A. E., Özgentürk N. Ö.
Molecular Diversity , 2024 (SCI-Expanded) identifier identifier

Exploring the antifungal potential of Cannabis sativa-derived stilbenoids and cannabinoids against novel targets through in silico protein interaction profiling

KIRBOĞA K. K., Karim A., KÜÇÜKSİLLE E. U., Rudrapal M., Khan J., Achar R. R., et al.
Frontiers in Chemistry , cilt.12, 2024 (SCI-Expanded) identifier identifier

Identifying Cardiovascular Disease Risk Factors in Adults with Explainable Artificial Intelligence

KIRBOĞA K. K., KÜÇÜKSİLLE E. U.
Anatolian Journal of Cardiology , cilt.27, sa.11, ss.657-663, 2023 (SCI-Expanded) identifier identifier

Explainability and white box in drug discovery

KIRBOĞA K. K., Abbasi S., KÜÇÜKSİLLE E. U.
Chemical Biology and Drug Design , cilt.102, sa.1, ss.217-233, 2023 (SCI-Expanded) identifier identifier

CVD22: Explainable artificial intelligence determination of the relationship of troponin to D-Dimer, mortality, and CK-MB in COVID-19 patients

KIRBOĞA K. K., KÜÇÜKSİLLE E. U., NALDAN M. E., IŞIK M., Gülcü O., Aksakal E.
Computer Methods and Programs in Biomedicine , cilt.233, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Gold nanoparticle-based strategies against SARS-CoV-2: A review

Rasmi Y., KIRBOĞA K. K., Khan J., Gupta E., Mostafa F., Yallapu M. M., et al.
Reviews on Advanced Materials Science , cilt.62, sa.1, 2023 (SCI-Expanded) Creative Commons License identifier

The importance of neopterin in COVID-19: The prognostic value and relation with the disease severity

Rasmi Y., Heidari N., Kübra Kırboğa K. K., Hatamkhani S., Tekin B., Alipour S., et al.
Clinical Biochemistry , cilt.104, ss.1-12, 2022 (SCI-Expanded) identifier identifier

Decellularized Alstroemeria flower stem modified with chitosan for tissue engineering purposes: A cellulose/chitosan scaffold

Esmaeili J., Jadbabaee S., Far F. M., Lukolayeh M. E., Kırboğa K. K., Rezaei F. S., et al.
International Journal of Biological Macromolecules , cilt.204, ss.321-332, 2022 (SCI-Expanded) identifier identifier
Diğer Dergilerde Yayınlanan Makaleler

Bioinformatics-Driven Structural and Pharmacological Analysis of SLITRK1 in Tourette Syndrome: Impact of S656M Mutation Using Molecular Dynamics, Docking, and Reinforcement Learning

AKTAŞ E., İslim A., KIRBOĞA K. K., Yıldız D., Özgentürk N. Ö., Rudrapal M., et al.
Computation , cilt.13, sa.2, 2025 (ESCI) identifier

Ignition of Small Molecule Inhibitors in Friedreichs Ataxia with Explainable Artificial Intelligence

KIRBOĞA K. K., KÜÇÜKSİLLE E. U., KÖSE U.
Asociatia LUMEN , cilt.14, 2023 (Hakemli Dergi)

Detection of new candidate compounds against four antibiotic targets using explainable artificial intelligence by molecular fingerprints

KIRBOĞA K. K., Ghafoor N. A., BAYSAL Ö.
International Journal of Multidisciplinary Studies and Innovative Technologies , 2023 (Hakemli Dergi)

Applications of Turmeric Starch and Curcumin

KIRBOĞA K. K.
Bayburt Üniversitesi Fen Bilimleri Dergisi , 2023 (Hakemli Dergi)

Development of gold nanoparticle-based biosensors for COVID-19 diagnosis

Khan J., Rasmi Y., Kırboğa K. K., Ali A., Rudrapal M., Patekar R. R.
Beni-Suef University Journal of Basic and Applied Sciences , cilt.11, sa.1, 2022 (Scopus) identifier identifier

Perspectives on Computer Aided Drug Discovery

KIRBOĞA K. K., KÜÇÜKSİLLE E. U.
Dicle Üniversitesi Fen Bilimleri Enstitüsü Dergisi , cilt.11, 2022 (Hakemli Dergi)

The Impact of Artificial Intelligence on the Medical Area: Detailed Review

KIRBOĞA K. K., KÜÇÜKSİLLE E. U., KÖSE U.
JOMUDE , cilt.6, sa.1, ss.54-73, 2021 (Hakemli Dergi)
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler

Harnessing Deep Reinforcement Learning for Personalized Cancer Treatment: Opportunities and Challenges

KIRBOĞA K. K.
5 th International Conference on Engineering and Applied Natural Sciences, Türkiye, 25 Ağustos 2024, (Tam Metin Bildiri)

Identification and Analysis of Cancer-Associated and Dysfunctional Non-Globular Proteins: A Bioinformatics Approach

KIRBOĞA K. K.
2 nd MEETING on MACHINE LEARNING AND NON-GLOBULAR PROTEINS, Thessaloniki, Yunanistan, 14 - 17 Mayıs 2024, (Özet Bildiri)

XAI-PT: Exploring Post-Transcriptional Biology with Explainable Artificial Intelligence

KIRBOĞA K. K.
4TH INTERNATIONAL CONFERENCE ON INNOVATIVE ACADEMIC STUDIES ICIAS 2024, Türkiye, 12 Mart 2024, (Özet Bildiri)

An Overview of Artificial Intelligence and Explainability in Pharmacovigilance

Kırboğa K. K., Çiftci B., Işık M.
2ND INTERNATIONAL CONFERENCE ON ENGINEERING, NATURAL AND SOCIAL SCIENCES, Konya, Türkiye, 4 - 06 Nisan 2023, ss.415-422, (Tam Metin Bildiri) Creative Commons License

Designing enzymes and pathways using artificial intelligence for metabolicengineering

Kırboğa K. K., Işık M.
2nd International Conference on Engineering and Applied Natural Sciences, Konya, Türkiye, 10 Ekim 2022, (Özet Bildiri)

A Look at Computational Drug Discovery with Explainable Artificial Intelligence

KIRBOĞA K. K., KÜÇÜKSİLLE E. U.
1st International Conference on Innovative Academic Studies, Türkiye, 10 Eylül 2022, (Özet Bildiri)

Evaluation of the Drugs Tested in the Treatment of Covid-19 (Sars-Cov-2 Infection) on the Molecular Virus Replication

KIRBOĞA K. K.
Suleyman Demirel University Faculty of Medicine Health Symposium, Isparta, Türkiye, 01 Nisan 2019, (Özet Bildiri)
Kitaplar

Chapter 5 - Molecular cloning of drug targets

KIRBOĞA K. K., ÇİFTCİ B.
Biochemical and Molecular Pharmacology in Drug Discovery , , Editör, Elsevier, ss.99-117, 2024